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Communication Features

Following file formats can be automatically recognized and read by Biodesigner:
  • Protein Data Bank PDB
  • Tripos Sybyl MOL2
  • Tripos Alchemy MOL
  • Hypercube Hyperchem HIN
  • MSI Discover CAR
  • MONSSTER Trajectory TRA
  • MONSSTER CHAIN
  • Biodesigner BIO
Additionally, following file formats are supported by Protein Sequence Processor:
  • Protein Data Bank PDB
  • FASTA
  • PSI-BLAST
  • PIR alignments
  • raw text file
Alignments can be saved as raw text, FASTA, or HTML files.
Biodesigner can export following file formats:
  • Protein Data Bank PDB
  • Biodesigner BIO


  • Windows Bitmap BMP
  • Raw Bitmap RAW
  • Postscript PS
  • Video file AVI
  • POV-Ray POV


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